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Species belonging to selected taxon:

Hevea brasiliensis, Jatropha curcas, Manihot esculenta



ABOUT THIS RECORD

ID: MNEST045662
species: Manihot esculenta
source: microPC, original name: miR171

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGATTGAGCCGCGTCAATAT

miRNA*
ATTGGCGTGCCTCAATCTAA

mismatches: 3
bulges: 0

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pre-miRNA
TATTGGCGTGCCTCAATCTAATTACATGGTTAAATGATATGTTTTAGCCAAGTACTTTTGATTGAGCCGCGTCAATAT

dot-bracket secondary structure
((((((((((.(((((((.((.(((.((((((((........)))))))).))).))..))))))).)))))))))).


SIMILARITIES
miRBase vvi-MIR171b: 0.00001

PMRD vvi-miR171b: 0.00001

microPC miR171: 5e-39
UniProt no hits

RFAM MIR171_1: 0.0003

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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