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Species belonging to selected taxon:

Hevea brasiliensis, Jatropha curcas, Manihot esculenta



ABOUT THIS RECORD

ID: MNEST046490
species: Manihot esculenta
miRNA family: MIR399
source: microPC, original name: miR399

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAATTGCCC

miRNA*
GCGACTCTCCCTTGGCAAA

mismatches: 3
bulges: 0

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pre-miRNA
GGCGACTCTCCCTTGGCAAACGGATGATGATCACTATTCACCATGCAAATTAATGCATAATCTGCTTTGCCAAAGGAGAATTGCCC

dot-bracket secondary structure
(((((.(((((.(((((((((((((..(((.......)))..(((((......))))).))))).)))))))).))))).))))).


SIMILARITIES
miRBase vvi-MIR399h: 0.00002

PMRD vvi-miR399h: 0.00002

microPC miR399: 1e-43
UniProt no hits

RFAM mir-399: 0.0003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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