miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Litopenaeus vannamei, Lepeophtheirus salmonis, Daphnia pulex, Petrolisthes cinctipes, Penaeus monodon, Artemia franciscana, Caligus rogercresseyi, Homarus americanus, Eriocheir sinensis, Carcinus maenas, Lernaeocera branchialis, Caligus clemensi, Daphnia magna, Gammarus pulex, Calanus finmarchicus, Callinectes sapidus, Fenneropenaeus chinensis



ABOUT THIS RECORD

ID: MNEST009720
species: Carcinus maenas
miRNA family: mir-46
source: miRNEST

Taxonomy by NCBI:
Carcinus maenas Carcinus Portunidae Portunoidea Heterotremata Heterotremata/Thoracotremata group Eubrachyura Brachyura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTCATGGAGTTGCTCTCTTT

miRNA*
 AGAGAGCTATCCGTCGACAGT

mismatches: 3
bulges: 2
View larger
pre-miRNA
 TCTGCACTATCAAGAGAGCTATCCGTCGACAGTACTGGAGCCAAACAACTGTCATGGAGTTGCTCTCTTTATGGACAGG

dot-bracket secondary structure
((((..((((.((((((((..(((((.((((((..((........)))))))))))))...)))))))).)))).))))


SIMILARITIES
miRBase bmo-mir-281: 0.000000000001

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-281: 0.000001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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