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Species belonging to selected taxon:

Cucumis melo subsp. melo



ABOUT THIS RECORD

ID: MNEST000486
species: Cucumis melo subsp. melo
miRNA family: MIR168
source: miRNEST

Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGAA

miRNA*
CCCGCCTTGCATCAACTGAAT

mismatches: 3
bulges: 0

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pre-miRNA
ACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGCTTCGCTCAGCCTACGGTTTACGTTTTGTCGTTGGCCGGTCCTTCTTCATTTTCCTTTTT
TGTTCTTCTCTGCTTTTGTTTTTTGCTTAATTTCTTTGCCGCTGTGCGGTGTTATCTTGTTGCGAAAATGTGTGGGCGAATTGGATCCCGCCTTGCATCA
ACTGAAT
CGAAAACCGTGG


dot-bracket secondary structure
....(((((.((..(((((.((((((((((.(((((.(((.(((((((((((.((((...........)))).))).((........((...........
)).......))((......(((((((.(((......((((((...)))))).....)))..))))))).)).)))))))).))).))))).)))))))))
).)))))
.))..)))))..



SIMILARITIES
miRBase crt-MIR168: 0.00000000000001

PMRD rco-miR168: 0.00000000000001

microPC miR168: 0.0000000002
UniProt no hits

RFAM MIR168: 0.0000000000002
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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