miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Anopheles stephensi



ABOUT THIS RECORD

ID: MNEST008505
species: Culex quinquefasciatus
miRNA family: miR-1816
source: miRNEST

Taxonomy by NCBI:
Culex quinquefasciatus Culex pipiens complex Culex Culex Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGGTTTTGTTGTTTTGTTT

miRNA*
ACAAAAGGACGATGTTCACACTT

mismatches: 3
bulges: 2

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pre-miRNA
ATTTTACAAATGTCGGGTCGGGTTGGTTTTGTTGTTTTGTTTGTTTTCTTATGAAGGATGTCGGAACAAAAGGACGATGTTCACACTTTTTTGCTTTGCA
TTGCTT


dot-bracket secondary structure
........(((((.((((.(((((((..(((((.((((((((...(((((...))))).....)))))))).)))))...))).))))....)))).)))
))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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