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Species belonging to selected taxon:
Curcuma longa
ABOUT THIS RECORD
ID:
MNEST000502
species:
Curcuma longa
miRNA family:
MIR167
source:
miRNEST
Taxonomy by NCBI:
Curcuma longa
Curcuma
Zingiberaceae
Zingiberales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTC
miRNA*
GATCATTATGGCAGTTTCATC
mismatches:
2
bulges:
0
View larger
pre-miRNA
TGCATGTGCACCAAAAGTAGC
TGAAGCTGCCAGCATGATCTC
ATGATATCCTTCTTTTCTTTTTCTTCTCAATCTCTCCTTTTGAATTTGTTTTCCGAAA
AAAATAGATTAAAAATTCTGTATATGTAACTAGGTCTAAATGTGAAGGAATCGACGA
GATCATTATGGCAGTTTCATC
TGCTATTGGGGAGCACAA
dot-bracket secondary structure
....(((((.((((.(((((.
(((((((((((..((((((((
.((((.((((((.........(((..............(((.((((((((((......
))))))))))..)))................))).........))))))))))..))
))))))..))))))))))).)
)))).))))...))))).
SIMILARITIES
miRBase
sbi-MIR167d
:
0.00000004
PMRD
sbi-miR167d
:
0.00000004
microPC
miR167
:
6e-35
UniProt
no hits
RFAM
MIR167_1: 0.0000007
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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