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Species belonging to selected taxon:

Cycas rumphii, Zamia vazquezii



ABOUT THIS RECORD

ID: MNEST045876
species: Cycas rumphii
miRNA family: MIR167
source: microPC, original name: miR167

Taxonomy by NCBI:
Cycas rumphii Cycas Cycadaceae Cycadales Cycadopsida Cycadophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTG

miRNA*
GATCATGTGGCAGTCTCA

mismatches: 3
bulges: 1

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pre-miRNA
TGAAGCTGCCAGCATGATCTGGTTAATATTGCTCTCGCCAGTTGCTTTTGGGTACCAGATCATGTGGCAGTCTCA

dot-bracket secondary structure
.((..((((((.(((((((((((...((..((...(....)..))...))...)))))))))))))))))..)).


SIMILARITIES
miRBase zma-MIR167g: 0.0000002

PMRD zma-miR167g: 0.0000002

microPC miR167: 3e-37
UniProt no hits

RFAM MIR167_1: 0.000004

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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