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Species belonging to selected taxon:

Cycas rumphii, Zamia vazquezii



ABOUT THIS RECORD

ID: MNEST000509
species: Cycas rumphii
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Cycas rumphii Cycas Cycadaceae Cycadales Cycadopsida Cycadophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGTTTGAAGGGAGCTCTA

miRNA*
GAGCTCCTTGAAGTCCAATCA

mismatches: 4
bulges: 0

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pre-miRNA
TATGTGAGAATAAGGAGATTGTAGAGCTCCTTGAAGTCCAATCAAGGCTTGCGCAAGGTCGGTTCAGCTGCTGATTTATGCATTCCGCTGCCCTGATCGC
GTCCTCGGATTCCAGAGTTGCATGGCAGGGCTAGCGGTGTGCATGACGCAGGAGCTGTATTGACCGTGTGCTTCCCTTTTTTGGTTTGAAGGGAGCTCTA
CAGGAGTCTTTTATTCGTTT


dot-bracket secondary structure
.......(((((((((..((((((((((((((..((.((((..((((...(((((.(((((((.(((((.(((..((((((((.(((((((((((...((
(..(((........))).)))....)))))).))))).))))))))..))).))))).))))))).)))))...))))..)))).))..)))))))))))
)))...)).)))))))....



SIMILARITIES
miRBase csi-MIR159: 0.0002

PMRD psi-miR159: 0.00001

microPC miR319: 0.00001
UniProt no hits

RFAM MIR159: 0.0002
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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