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Species belonging to selected taxon:
Danio rerio
,
Pimephales promelas
,
Cyprinus carpio
,
Misgurnus anguillicaudatus
,
Rutilus rutilus
ABOUT THIS RECORD
ID:
MNEST034186
species:
Danio rerio
miRNA family:
mir-7
source:
miRBase, original name:
dre-mir-7a-1
(
MI0001361
)
Taxonomy by NCBI:
Danio rerio
Danio
Cyprinidae
Cyprinoidea
Cypriniformes
Cypriniphysi
Otophysi
Ostariophysi
Otocephala
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGAAGACTAGTGATTTTGTTGT
miRNA*
AACAAGTCACAGTCTACCTCA
mismatches:
2
bulges:
2
View larger
pre-miRNA
TG
TGGAAGACTAGTGATTTTGTTGT
TGTTTCTTCTGCTTTCTGAC
AACAAGTCACAGTCTACCTCA
GCGAGCGGGCCCT
dot-bracket secondary structure
((
.((.(((((.(((((((.(((((
(................)))
))))))))))))))).)).))
.............
SIMILARITIES
miRBase
xtr-mir-7-2
:
0.000000004
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-7: 1e-37
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP,
Science. 299:1540(2003).
,
"Vertebrate microRNA genes"