miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Pimephales promelas, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus



ABOUT THIS RECORD

ID: MNEST007287
species: Pimephales promelas
miRNA family: miR-4104
source: miRNEST

Taxonomy by NCBI:
Pimephales promelas Pimephales Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACGTGAAATTGTTGAATGACT

miRNA*
ATTTGTCAACAAATTCACTTT

mismatches: 3
bulges: 2

View larger
pre-miRNA
CCTGCCAATAAGATTTGTCAACAAATTCACTTTAACATAAGAATAGATGTTGCATGCGCAGCGCCTTTTCAATGGACCGAATTAGACGTGAAATTGTTGA
ATGACT
ATGCAGAAC


dot-bracket secondary structure
.((((.....((.((..(((((((.(((((((((((((..(((.((.((((((....)))))).)).))).))).......))))).))))).)))))))
..))))
..))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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