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Species belonging to selected taxon:

Fundulus heteroclitus, Poecilia reticulata



ABOUT THIS RECORD

ID: MNEST008994
species: Fundulus heteroclitus
miRNA family: miR-1551
source: miRNEST

Taxonomy by NCBI:
Fundulus heteroclitus Fundulus Fundulidae Cyprinodontoidei Cyprinodontiformes Atherinomorpha Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGTTTGTGTTGCAGTTTTC

miRNA*
AGTTTGCTCATGAATCCAGC

mismatches: 3
bulges: 1

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pre-miRNA
AAAAAAAATAATATTTGCTTGAAGTTTGCTCATGAATCCAGCACCATTTTATTAATAGATCAATATATGAAGTACTAAAGAATTGTTCAACTATGACAAT
CCGCTTCTTAGTTCTTACTGTTGAGTTTGTGTTGCAGTTTTCTGCTGTTTGTTAAGGCCTA


dot-bracket secondary structure
........(((((...((..((((.((((.(((((((.(((((.(((..((((........)))).)))(((.(((((((.((((((.......))))))
...))..))))).)))..))))).)))))))..)))).)))).))....))))).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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