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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis



ABOUT THIS RECORD

ID: MNEST000155
species: Arachis ipaensis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGGGATCAGGCAGAGCATGA

miRNA*
ATGCACTGCCTCTTCCCTGGTT

mismatches: 4
bulges: 1

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pre-miRNA
ATGTATTGATACTGGGATCAGGCAGAGCATGACTGGAGCTACCTATATACACATTTGTTCATTGAGTCACAGAAGGAAACACACACATATACATACACAC
TTAGATAAAGACATGATACATCATCTCATCTATTGTGTCTATTCTCATGCACTGCCTCTTCCCTGGTTCTCTCTT


dot-bracket secondary structure
.......((.(((((((..((((((.(((((.(((..(((........(((....)))......)))..)))..((((...............((.((((
.(((((...((.((((....)))).)))))))..)))).))))))))))).))))))..)))).)))..))....



SIMILARITIES
miRBase ahy-MIR408: 0.000000009

PMRD ppt-miR408b: 0.000009

microPC miR408: 0.000009
UniProt no hits

RFAM MIR408: 0.00004
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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