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Species belonging to selected taxon:
Daphnia pulex
ABOUT THIS RECORD
ID:
MNEST008594
species:
Daphnia pulex
miRNA family:
mir-34
source:
miRNEST
Taxonomy by NCBI:
Daphnia pulex
Daphnia
Daphniidae
Anomopoda
Cladocera
Diplostraca
Phyllopoda
Branchiopoda
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGCAGTGTGGCTAGCTGGTTG
miRNA*
GCCACTATCCAAACTGTCCA
mismatches:
2
bulges:
1
View larger
pre-miRNA
GCAAAAAGTGTATTGATGGTT
GGCAGTGTGGCTAGCTGGTTG
TGAAATATTTAATTGAATCCACA
GCCACTATCCAAACTGTCCA
CTGTCGATGACACGA
TAT
dot-bracket secondary structure
.......(((((((((((((.
((((((.(((.(((.((((((
((....((((....)))).))))
))))))).))).)))))).)
)))))))).))))..
...
SIMILARITIES
miRBase
dpu-mir-34
:
2e-45
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-449: 0.0003
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record