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Species belonging to selected taxon:

Daphnia pulex, Daphnia magna



ABOUT THIS RECORD

ID: MNEST008591
species: Daphnia pulex
miRNA family: miR-450a
source: miRNEST

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTGGGTACATTTTGCAGAAA

miRNA*
TCTAATGATGATCCAGT

mismatches: 3
bulges: 2

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pre-miRNA
GATTGGGTACATTTTGCAGAAAAATCAATGTTGTATTTCTTTTTCACTTTATTTACATCACATTTACACTTCTTTGCCATTACAATTTTCCTTTATTTCA
TGTTGTTTTGAGCCTTTTCTAGCTCATGAAGAAGATCATAAAACTGTTTAAGTGATAATTCCATCACCGTTGTTTCTAATGATGATCCAGT


dot-bracket secondary structure
.(((((((.((((....(((((...(((((.((.......((.((((((.....(((...........((((((((..(..(((((..............
.)))))..)((((........)))).))))))))..........)))..)))))).))......)).))))))))))...)))))))))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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