miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Litopenaeus vannamei
,
Petrolisthes cinctipes
,
Penaeus monodon
,
Homarus americanus
,
Eriocheir sinensis
,
Carcinus maenas
,
Callinectes sapidus
,
Fenneropenaeus chinensis
ABOUT THIS RECORD
ID:
MNEST007604
species:
Litopenaeus vannamei
miRNA family:
miR-4307
source:
miRNEST
Taxonomy by NCBI:
Litopenaeus vannamei
Litopenaeus
Penaeidae
Penaeoidea
Dendrobranchiata
Decapoda
Eucarida
Eumalacostraca
Malacostraca
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATGTTTTTTCCTTTTTCGAA
miRNA*
AGAAAAGAAAAAAAAATGTTGC
mismatches:
5
bulges:
1
View larger
pre-miRNA
GTGC
AATGTTTTTTCCTTTTTCGAA
ACATTTGGTCCTTCAAACGGTGCAAGAGCTAAAAAAAAAAAAAAAAAAAA
AGAAAAGAAAAAAAAATGTTGC
A
dot-bracket secondary structure
.(((
((((((((((..((((((...
...((((((.(((((.....)).))).)))))).................
.))))))...))))))))))))
)
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record