miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Trichosurus vulpecula, Macropus eugenii



ABOUT THIS RECORD

ID: MNEST007701
species: Trichosurus vulpecula
miRNA family: miR-21
source: miRNEST

Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGAGCAGTCGAAGGGCTGTA

miRNA*
CAGATTTTCATAGCTTAAGA

mismatches: 5
bulges: 1

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pre-miRNA
TTCGGAGCAGAAAGAGCAGTCGAAGGGCTGTACTTCTGGTTGGCCTTTGTGACTCGGGGAAGACGCTCCTTTTTGTCAGGCTGTTAACGGGACTTTACAG
ATTTTCATAGCTTAAGA
CAGTATCA


dot-bracket secondary structure
(((......))).((((.((.((((..(((((.(((((..(((((....((((..(((((......)))))...)))))))))....)))))...)))))
.)))).)).))))..((
.....)).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9Y5M8|SRPRB_HUMAN: 0.0000000004

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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