miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Trichosurus vulpecula, Macropus eugenii



ABOUT THIS RECORD

ID: MNEST007707
species: Trichosurus vulpecula
miRNA family: miR-147
source: miRNEST

Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGGAAACATTTCTGCACAAAC

miRNA*
GTGTGCGGAAGTGCTTCTGCT

mismatches: 4
bulges: 0

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pre-miRNA
AAGAACACTCTATGAATCTAGCGGAAACATTTCTGCACAAACTATACTACTGAAACCAGTGTGCGGAAGTGCTTCTGCTACATTTTTAGGGTCTCCC

dot-bracket secondary structure
......((((((.((((.((((((((.((((((((((((....................)))))))))))).)))))))).)))).)))))).....


SIMILARITIES
miRBase mdo-mir-147b: 1e-31

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-147: 3e-23
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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