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Species belonging to selected taxon:
Drosophila melanogaster
,
Aedes aegypti
,
Culex quinquefasciatus
,
Anopheles gambiae
,
Drosophila simulans
,
Glossina morsitans morsitans
,
Phlebotomus papatasi
,
Drosophila sechellia
,
Drosophila auraria
,
Drosophila pseudoobscura
,
Teleopsis dalmanni
,
Lutzomyia longipalpis
,
Drosophila willistoni
,
Drosophila ananassae
,
Drosophila virilis
,
Drosophila erecta
,
Drosophila grimshawi
,
Ceratitis capitata
,
Drosophila mojavensis
,
Cochliomyia hominivorax
,
Anopheles stephensi
,
Haematobia irritans irritans
,
Polypedilum vanderplanki
,
Drosophila yakuba
ABOUT THIS RECORD
ID:
MNEST009183
species:
Phlebotomus papatasi
miRNA family:
miR-4279
source:
miRNEST
Taxonomy by NCBI:
Phlebotomus papatasi
Phlebotomus
Phlebotomus
Phlebotominae
Psychodidae
Psychodoidea
Psychodomorpha
Nematocera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCTCCCGGCTTCATTGA
miRNA*
ATTGAAGATCGGGAGGAGTTCT
mismatches:
2
bulges:
1
View larger
pre-miRNA
CTTGCTGATGTACTCTTATTAAATGGTCCAGGATAAAATTGATTGTGTCTTTATTTGGTTGCGGCAGCTC
ATTGAAGATCGGGAGGAGTTCT
T
TACTCCT
CCCGGCTTCATTGA
AATTGCTGTACTTATTGTAAGTTTCAAACAATTTGGGGTAGTACTGATCGGAAAAGAGTGCCTCTGG
dot-bracket secondary structure
......((.((((((((.((...(((((.((.((.((((((.(((...(((....(((.((((((((.((
(.(((((.(((((((((((...
.
.))))))
)))))))))).)))
..)))))))).)))....)))...))).))))))...))....))))))).)))))))))).))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record