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Species belonging to selected taxon:

Drosophila melanogaster, Drosophila simulans, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Drosophila mojavensis, Drosophila mojavensis, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST006574
species: Drosophila melanogaster
miRNA family: mir-46
source: miRNEST

Taxonomy by NCBI:
Drosophila melanogaster melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGAGAGCTGTCCGTCGACAG

miRNA*
GTCATGGAATTGCTCTCTTTG

mismatches: 2
bulges: 2

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pre-miRNA
CAAATGCGAATAAGTGAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAACTATTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGA
TG


dot-bracket secondary structure
....((((((((..((.(((((((((((..(((((.((((((...................)))))))))))...))))))))))).)).)))))).)).
..



SIMILARITIES
miRBase dme-mir-281-1: 5e-46

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-46: 0.00009
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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