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Species belonging to selected taxon:
Paracentrotus lividus
ABOUT THIS RECORD
ID:
MNEST007750
species:
Paracentrotus lividus
miRNA family:
miR-2693
source:
miRNEST
Taxonomy by NCBI:
Paracentrotus lividus
Paracentrotus
Echinidae
Echinoida
Echinacea
Euechinoidea
Echinoidea
Echinozoa
Eleutherozoa
Echinodermata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGTCTAGTGTCCAGTTCATC
miRNA*
CAATTAGGCTATTGGACAAAT
mismatches:
2
bulges:
2
View larger
pre-miRNA
CGCCTGTTAACCATTTTTCCTAATTCCCATT
TTGTCTAGTGTCCAGTTCATC
TAAAGTTCACGTGGTCTAACACCACTTGGTCACTTCCAGTAACAAGCT
GGTAATAGACCAAATATTCATTTAGACATAAGACCAAAATGCAATTAGA
CAATTAGGCTATTGGACAAAT
TGGCAATTTGACCAAGTGGTCAGTAGAC
dot-bracket secondary structure
...(((((.(((((((.((..((((.(((.(
((((((((((.((((((..((
(((.((.....((((((........((((((....(((((.....)))
)).....)))))).................))))))....))..)))))
.)))).)).))))))))))).
))).)))).))..))))))).)))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record