miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Paracentrotus lividus, Strongylocentrotus purpuratus, Patiria pectinifera



ABOUT THIS RECORD

ID: MNEST007756
species: Paracentrotus lividus
miRNA family: miR-516a
source: miRNEST

Taxonomy by NCBI:
Paracentrotus lividus Paracentrotus Echinidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCTCGAGGAAAGAAGCTCTA

miRNA*
AAGCTGCTGTTGCGAGAACA

mismatches: 5
bulges: 1

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pre-miRNA
ATGATTACAGTGAAGCTGCTGTTGCGAGAACAGATGAACAGTACAAATACCGCTACATTTACAAGGGTGCTCCTAGCTCTCGAGGAAAGAAGCTCTACTA
TGTCTA


dot-bracket secondary structure
..(((...((((.((((.((.((.(((((..(((((...(((.........))).)))))...((((...))))...))))).))..)).)))).)))).
.)))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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