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Species belonging to selected taxon:
Paracentrotus lividus
,
Strongylocentrotus purpuratus
ABOUT THIS RECORD
ID:
MNEST034834
species:
Strongylocentrotus purpuratus
source:
miRBase, original name:
spu-mir-252a
(
MI0010208
)
Taxonomy by NCBI:
Strongylocentrotus purpuratus
Strongylocentrotus
Strongylocentrotidae
Echinoida
Echinacea
Euechinoidea
Echinoidea
Echinozoa
Eleutherozoa
Echinodermata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTAAGTACTAGTGCCGTAGGTT
miRNA*
CCTGTAGTACTAGTACTTAA
mismatches:
3
bulges:
0
View larger
pre-miRNA
CACGTGACTATGTTCCGTC
CTAAGTACTAGTGCCGTAGGTT
AACTGAGAAGGAAAGTGAAGCTAGACCATAGCTTCTCAGA
CCTGTAGTACTAGTACTTA
A
dot-bracket secondary structure
.(((..((...))..))).
.(((((((((((((..((((((
..((....))....(.(((((((.....))))))).).))
))))..)))))))))))))
.
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"