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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST003879
species:
Oryza sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTCCATCCCAAAATGTAGTT
miRNA*
CAAAATTTTGGGATGGAGGTA
mismatches:
3
bulges:
0
View larger
pre-miRNA
ACTGTATACTA
CCTCCATCCCAAAATGTAGTT
ACCTAGTACTCAACTGGACACCTCCTAGTACTATAAAACTGGACCAGGGGTGTCCAATTTCGTACTAG
GTAG
CAAAATTTTGGGATGGAGGTA
GTAATGTT
dot-bracket secondary structure
......(((((
(((((((((((((((...(((
(((((((((..((.((((((((.(((.((.(((......))))).))))))))))).))..)))))))
))))
)...)))))))))))))))))
))).....
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11001-akr
:
0.000006
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.0000001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record