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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST045568
species:
Oryza sativa
source:
microPC, original name:
miR1436
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTATGGGACGGAGGGAGT
miRNA*
TCCCTCCGTCCCAAAAGT
mismatches:
1
bulges:
0
View larger
pre-miRNA
AC
TCCCTCCGTCCCAAAAGT
NAATCTANCTCTGTATGTGACACATTATAGTACAACGAATCTGGATAGAAATATGTGTANATTCGTAGTACTAGGATGTG
TCGCATCGAGTGTTGGTTTT
TTATGGGACGGAGGGAGT
dot-bracket secondary structure
((
(((((((((((((.((..
.((((...(((.(.((((((((((((.((((((.((((((.((.(((......))).)).)))))).)))))).))))))
))))))))))....))))..
)).)))))))))))))))
SIMILARITIES
miRBase
osa-MIR814c
:
0.000007
PMRD
osa-miRf10842-akr
:
0.0000001
microPC
miR1436
:
4e-69
UniProt
no hits
RFAM
MIR1122: 4e-23
MORE
miRNEST target predictions
non-miRNEST targets: none
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