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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004580
species:
Oryza sativa
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTACATTGTGAAACGGAGGGA
miRNA*
CCTCCGTTTCACAATATAAGT
mismatches:
1
bulges:
0
View larger
pre-miRNA
CTTGCTACTT
CCTCCGTTTCACAATATAAGT
CATTCTAGCATATCCCACATTCATATTGATGTTAATGAATCTAAACATCAATATGAATGTGGAAAATGC
TAAAATGAC
TTACATTGTGAAACGGAGGGA
GTAGCAA
dot-bracket secondary structure
.(((((((((
(((((((((((((((.(((((
((((.((((((...(((((((((((((((((((..........)))))))))))))))))))...))))
)).))))))
))).)))))))))))))))))
)))))))
SIMILARITIES
miRBase
osa-MIR809b
:
2e-34
PMRD
osa-miR809b
:
2e-34
microPC
miR809
:
0.0000000000001
UniProt
no hits
RFAM
MIR1122: 1e-69
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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