miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST046664
species:
Oryza sativa
source:
microPC, original name:
miR160
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCTGGCTCCCTGTATGCCA
miRNA*
GNGTGCACGGAGCCAAGC
mismatches:
3
bulges:
0
View larger
pre-miRNA
GCCTGGCTCCCTGTATGCCA
CTCATCTAGAGCAACAAACTTCTGCGAGAGGTTGCCTATGATGGATG
GNGTGCACGGAGCCAAGC
dot-bracket secondary structure
((.(((((((.(((((.(((
..(((((((.(((((...(((....)))..)))))))).))))..))
).))))).))))))).))
SIMILARITIES
miRBase
osa-MIR160c
:
2e-41
PMRD
osa-miR160c
:
2e-41
microPC
miR160
:
2e-41
UniProt
no hits
RFAM
mir-160: 4e-40
MORE
miRNEST target predictions
non-miRNEST targets: none
download this record