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Species belonging to selected taxon:

Elaeis guineensis



ABOUT THIS RECORD

ID: MNEST000554
species: Elaeis guineensis
miRNA family: miR157d
source: miRNEST

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTCTCTATGCTTCTGTCATC

miRNA*
TGACAGAAGATAGAGAGCAC

mismatches: 1
bulges: 1

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pre-miRNA
ATGCTGTTGACAGAAGATAGAGAGCACAGATGATGACATGCAAGACCCATTGCATCTCACTCCTTTGTGCTCTCTATGCTTCTGTCATCACCT

dot-bracket secondary structure
....((.(((((((((((((((((((((((.(((((.((((((......)))))).))).)).)))))))))))))).))))))))).))...


SIMILARITIES
miRBase vvi-MIR156i: 1e-27

PMRD vvi-miR156i: 1e-27

microPC miR157: 8e-20
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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