miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Paracentrotus lividus, Strongylocentrotus purpuratus, Patiria pectinifera



ABOUT THIS RECORD

ID: MNEST008610
species: Strongylocentrotus purpuratus
miRNA family: miR-2444
source: miRNEST

Taxonomy by NCBI:
Strongylocentrotus purpuratus Strongylocentrotus Strongylocentrotidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTATTTTGTTTTTTGTTTTT

miRNA*
AAAAAAAAGATATGGTTTGGG

mismatches: 4
bulges: 0

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pre-miRNA
TATTTTTTTTTTTTATTTTGTTTTTTGTTTTTTCTTAAAGGAAGATGTTTGAGTAGAATTTTTGATTTTTTGTATGTAAAAAAGAAAGAAGGTTTTGAAT
GTTGGTTTGTGGGTTTAAAAAAAAAAGATATGGTTTGGGGTTTGAAA


dot-bracket secondary structure
..((((..((((..(((.((((((((.(((((.((((.(((..((((((((((.....(((((..(((((((....)))))))..)))))...)))))))
)))..))).))))...))))).)))))))).)))..))))...))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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