miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Euphorbia esula
,
Hevea brasiliensis
,
Jatropha curcas
,
Manihot esculenta
,
Ricinus communis
ABOUT THIS RECORD
ID:
MNEST045218
species:
Euphorbia esula
source:
microPC, original name:
miR319
Taxonomy by NCBI:
Euphorbia esula
Euphorbia
Euphorbieae
Euphorbioideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCC
miRNA*
AGCTCCTTTCTGTCCAAAAA
mismatches:
2
bulges:
0
View larger
pre-miRNA
G
AGCTCCTTTCTGTCCAAAAA
GAGGATCTTGCTGGGTAGATCAAGCTGCTGGACTATGGATCCCAAAAGTCCTATCCTCTAATTTTAAGGGTAGGCTTAT
GGCTTGCATATTTCAGGAGCTTTATTACCTTTTAGTTTGATCTTTA
TTTGGATTGAAGGGAGCTCC
dot-bracket secondary structure
(
((((((((((.(((((((..
(((((((..(((((((((...(((((.(((((.((((.(..(((.(((.((((((((.........))))))))))).)
))..).)))).))))).)))))..))))))...)))..))))))).
))))))).))))))))))).
SIMILARITIES
miRBase
rco-MIR159
:
0.000000000000009
PMRD
ptc-miR159b
:
0.00000000000004
microPC
miR319
:
4e-91
UniProt
no hits
RFAM
MIR159: 0.0000000000002
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record