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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Manihot esculenta, Ricinus communis



ABOUT THIS RECORD

ID: MNEST001517
species: Manihot esculenta
miRNA family: miR166d
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAATGTTGTCTGGCTCGAGG

miRNA*
TCGGACCAGGCTTCATTCCCC

mismatches: 4
bulges: 0

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pre-miRNA
CTTTCTCTGAAATGAATTCAAAGGAAGTTTCTCTTTTGAGGGGAATGTTGTCTGGCTCGAGGACTCTCTTTGATCCTTTTTTTTTTTCCCTCAAAGTATA
TCCATAGATCTGATCTAAAGCATGTATGGGTATAAGGAGTAGATTGATCATCAGCTATAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTAAAGCTTC
CGTTCTGATTTTTCAAGTTCTGCA


dot-bracket secondary structure
........(((.((((.(((..((((((((.....(((.((((((((..((((((.((((.(((...((.(((((..(((.....((((.......((((
((((((.((((.......)).)).)))))))))).)))).)))..)))))........)).))).)))).))))))..)))))))).)))...)))))))
)....)))...))))..)))....



SIMILARITIES
miRBase aly-MIR166a: 8e-16

PMRD ath-miR166a: 0.0000000000002

microPC miR166: 0.0000000002
UniProt no hits

RFAM mir-166: 0.0000000000009
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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