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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Manihot esculenta, Ricinus communis



ABOUT THIS RECORD

ID: MNEST001520
species: Manihot esculenta
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCC

miRNA*
AATGTTGTCTGGCTCGAGG

mismatches: 3
bulges: 0

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pre-miRNA
CTCTTTTGAGGGGAATGTTGTCTGGCTCGAGGACTCTCTTTTGATGCTTTTACATACAGATCTAAGCATATTGATCAACTGCTAGTGTCGTCGGACCAGG
CTTCATTCC
CCCCAATTAA


dot-bracket secondary structure
.....(((.((((((((..((((((.((((.(((...((.(((((((((..............)))))......)))).....)).))).)))).)))))
)..))))))
)).)))....



SIMILARITIES
miRBase rco-MIR166e: 0.000000000000002

PMRD vvi-miR166c: 0.000000000002

microPC miR166: 7e-52
UniProt no hits

RFAM mir-166: 0.000000000000002
most similar mature miRNAs

Identical with: miR166 from microPC (MNEST045748)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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