miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Euphorbia esula
ABOUT THIS RECORD
ID:
MNEST045381
species:
Euphorbia esula
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Euphorbia esula
Euphorbia
Euphorbieae
Euphorbioideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCT
miRNA*
AGCTCCTTGAAGTCCAAAAG
mismatches:
2
bulges:
0
View larger
pre-miRNA
GG
AGCTCCTTGAAGTCCAAAAG
AGGATTTGCAGGGTAAATCAAGCTGCTAATCTATGGATTCCACAGTCCTAACCCTAATTAATTATGGGGGGATAGGCT
TGCGGCTTGCATATGTTAGGAGCTTTTTTACCTCTTTGTTTTATCTTTC
TTTGGATTGAAGGGAGCTCT
dot-bracket secondary structure
((
((((((((..((((((((..
(((((..((((((((((..(((((.(((((.((((.(..((.(((.((((.(((((........)))))...)))).)
)).))..).)))).))))).))))).)))))))...)))...)))))..
))))))))..))))))))))
SIMILARITIES
miRBase
ptc-MIR159c
:
0.000000000009
PMRD
ptc-miRf10271-akr
:
0.000000000009
microPC
miR159
:
6e-93
UniProt
no hits
RFAM
MIR159: 0.0000000002
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record