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Species belonging to selected taxon:
Oryzias latipes
,
Gasterosteus aculeatus
,
Gadus morhua
,
Oreochromis niloticus
,
Fundulus heteroclitus
,
Sparus aurata
,
Dicentrarchus labrax
,
Dissostichus mawsoni
,
Anoplopoma fimbria
,
Takifugu rubripes
,
Sebastes caurinus
,
Perca flavescens
,
Paralabidochromis chilotes
,
Hippoglossus hippoglossus
,
Poecilia reticulata
,
Paralichthys olivaceus
,
Psetta maxima
,
Lates calcarifer
,
Sebastes rastrelliger
,
Solea senegalensis
,
Thunnus thynnus
,
Cynoglossus semilaevis
ABOUT THIS RECORD
ID:
MNEST009107
species:
Dicentrarchus labrax
miRNA family:
miR-792
source:
miRNEST
Taxonomy by NCBI:
Dicentrarchus labrax
Dicentrarchus
Moronidae
Percoidei
Perciformes
Percomorpha
Euacanthopterygii
Acanthopterygii
Holacanthopterygii
Euacanthomorpha
Acanthomorpha
Ctenosquamata
Eurypterygii
Neoteleostei
Neognathi
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGAAATTTTTTTTATTTGCT
miRNA*
CAGAGGGAGAAGGATTGTCGGG
mismatches:
5
bulges:
1
View larger
pre-miRNA
CACCAAGCACAG
CAGAGGGAGAAGGATTGTCGGG
AAAACAGATGTCTCCTGAGGACGAAGGGGATGTTTCTAACAATGTGTGAATGAATGTGGACTTTGT
ACTCGACTATTGTGGCTTTATTTTCTTCTTTTCCTCTATTTATATTCAGATGACC
TTGAAATTTTTTTTATTTGCT
GTGTGCACG
dot-bracket secondary structure
......((((((
((((..((((((((((((((.(
((.....(((......(((((.((((((((((......((((((..(((.((.............)
).)))..)))))).....))))))))))...)))))....))).)))...)))).
....)))))))))).))))))
)))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record