miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST003483
species: Glycine max
miRNA family: miR166g
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGTTTGGCTCGAGG

miRNA*
 TCGGACCAGGCTTCATTCCCG

mismatches: 3
bulges: 0
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pre-miRNA
 AAATGAGAGATTGGGGTTGATGGGAATGTTGTTTGGCTCGAGGTAACTATGCATGGTCTTAATTTTGTTCATCTTTGAAGCTTTAATTTATGGGTTTCGA
TCTCTTTGATCCCTTGAAACAAAGAAAGCTTTAAAGGTTGGATTTTGAGGCTTTCTCGGACCAGGCTTCATTCCCGTAAACCTTATCTCTCTCTC

dot-bracket secondary structure
....((((((.(((((((.(((((((((..((((((.((((((...........((((((((....((((((((((((((((((..((((.(((..((((
.....)))).))).))))......))))))))))))).))))).)))))))).)))))).))))))..))))))))).)))))))..))))))..


SIMILARITIES
miRBase mtr-MIR166b: 0.0000000002

PMRD gma-miR166q: 4e-85

microPC miR166: 0.00001		UniProt no hits

RFAM mir-166: 0.000000003		most similar mature miRNAs

Identical with: gma-miR166q from PMRD (MNEST048552)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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