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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST001443
species: Lotus japonicus
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGCACTGCCTCTTCCCTGGC

miRNA*
 AGGAAAGAGGCAGAGCATGG

mismatches: 2
bulges: 1
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pre-miRNA
 AAGACAATGGCAGGAAAGAGGCAGAGCATGGATGGAGCTATCAACAAAATAAATTGAGAATGGGAGATGTTTGTTGTGGCTCTACTCATGCACTGCCTCT
TCCCTGGCCACGTCTC

dot-bracket secondary structure
.((((..(((((((.(((((((((.((((((.((((((((.(((((((....(((..........))).))))))))))))))).)))))).))))))))
).))).)))).)))).


SIMILARITIES
miRBase ptc-MIR408: 0.0000000004

PMRD ppe-miR408: 0.00000000000003

microPC miR408: 3e-51		UniProt no hits

RFAM MIR408: 8e-58		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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