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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST001447
species: Lotus japonicus
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAGCCAAGGATGACTTGTCG

miRNA*
 GCGAGGAATTCCGGCTCACT

mismatches: 3
bulges: 1
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pre-miRNA
 AAGGGTGTGAGCTCAAATGTCTCGCATGAAGAGGTAGAGAGAGTACGGTTTGAGCCAAGGATGACTTGTCGGCCGACATCTTATCATATAGAATTAGAGG
GTGCTCTTGGCCGGCGAGGAATTCCGGCTCACTTTTGCTCTCTCTCTTCTCATATGAGATTCACAAAAGAGCTAGCTTCA

dot-bracket secondary structure
..((((...(((((....((((((.((((.((((.((((((((((.((..((((((..((((..((((((((((((((((((...............)))
)))...))))))))))))..)))).)))))).)).)))))))))))))))))).))))))........))))).))))..


SIMILARITIES
miRBase gma-MIR169e: 0.0000000002

PMRD zma-miR169n: 0.000009

microPC miR169: 0.0006		UniProt no hits

RFAM MIR169_2: 8e-53		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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