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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040727
species: Medicago truncatula
miRNA family: MIR396
source: miRBase, original name: mtr-MIR396b (MI0005622)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACAGCTTTCTTGAACTG

miRNA*
 GTTCAATAAAGCTGTGGGAAG

mismatches: 1
bulges: 0
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pre-miRNA
 TATTCTTCCACAGCTTTCTTGAACTGCATCCAAATTGAGTTCCTTTGCATTGCCATGGCCATTGTTTTGCGGTTCAATAAAGCTGTGGGAAGATA

dot-bracket secondary structure
(((..((((((((((((.((((((((((..(((.....((......))...((....))..)))...)))))))))).))))))))))))..)))


SIMILARITIES
miRBase gma-MIR396a: 0.000000000000001

PMRD gma-miR396a: 0.000000000000001

microPC miR396: 0.000000000001		UniProt no hits

RFAM MIR396: 9e-48

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
degradome data
download this record

references
[1] Bonnet E, Unpublished (2007).,



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