miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST007530
species: Vigna unguiculata
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAAAGCTGCCAGCATGATCTG

miRNA*
 GGTCATCTTGCAGCTTCAAT

mismatches: 2
bulges: 1
View larger
pre-miRNA
 TCTTTTCACAAGTATGTTGGTTTGAGAGGTTAAAGCTGCCAGCATGATCTGGTAATCACCACACTCTTTTCCCTCATCTCATGCCTCATTTGAAAATCCA
TATCTACTCATTTTTTGGTTCAAATTCAAGGTTTCTTTCTGGTGTCAATCACTTCTGAAAAAAAAAAAAAGAAAAGGTTTTAACTTTACCTGGCTTGTTC
TTCTGCTTGATTTTCTTCATATTCTACAAAAGGGTCTTGTTATAAACTGGAATTGATCCTTAAAGGAAACCTACCAAAAAGGAAATTTTTTTGTTGTTAT
GAGATGTGGTTCCATCAGGTCATCTTGCAGCTTCAATCACTCAATAACCAACAGAGTAGTTTCT

dot-bracket secondary structure
..............((((((((((((.((((.(((((((.((.((((((((((....((((((.............(((((((...((..((((((...(
(.(((......((((((((.........((((((((((..((.(((((((..((((.............))))..(((((((((...((((...((((..
.......(((......)))......))))..))))...)))).))))).).)))))).))..))))))))))))))))))))).)).)))))).)).)))
))))))))))...)))))))))))).))))))).)))).))))..))))))))...........


SIMILARITIES
miRBase gma-MIR167c: 0.00000000000008

PMRD gma-miR167c: 0.00000000000008

microPC miR167: 0.00008		UniProt no hits

RFAM MIR167_1: 0.000000000000006		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;