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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST003460
species: Glycine max
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACAGCTTTCTTGAACTT

miRNA*
 GCTCAAGAAAGCTGTGGGAGA

mismatches: 1
bulges: 0
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pre-miRNA
 TCTCAAGTCCTGGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTATGCATCTTATATCTCTCCACCTCCAGGATTTTAAGCCCTAGAAGCTCAAGAAAG
CTGTGGGAGAATATGGCAATTCAGGCTT

dot-bracket secondary structure
....(((.((((((((((.(((((((((((((((((((.(((((.......((((.((((...........))))..))))....))))).)))))))))
)))))))))).))))))....)))))))


SIMILARITIES
miRBase gma-MIR396b: 2e-67

PMRD gma-miR396b: 2e-67

microPC miR396: 0.000002		UniProt no hits

RFAM MIR396: 5e-19		most similar mature miRNAs

Identical with: gma-miR396b from PMRD (MNEST048579)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
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deep sequencing data evidence




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