miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST045716
species: Glycine max
source: microPC, original name: miR319

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGAGTGAAGGGAGCTCC

miRNA*
 AGCTCTCTGCACTCCAGTG

mismatches: 1
bulges: 0
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pre-miRNA
 GGAGCTCTCTGCACTCCAGTGTTGAAGGAGGTGATGGTAAACCCTAGCTGCTAATTCATGGTTACCTTTGGCTTCCCATAAGGAAGCATGTGAAAGTCAT
GGGTTTACATGAATATGGAGACGGGGTTGCCTTGATCTTTTGGTATTGGAGTGAAGGGAGCTCC

dot-bracket secondary structure
((((((((((.((((((((((..((((((......(((((.((((..((.((((((((((...((((.((((((..((((.(....).)))).)))))).
))))...))))))).)))))..)))))))))....))))))..)))))))))).))))))))))


SIMILARITIES
miRBase gma-MIR159c: 1e-44

PMRD gma-miR159c: 1e-44

microPC miR319: 6e-90		UniProt no hits

RFAM MIR159: 0.000002

Identical with: miR159 from microPC (MNEST046555)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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Liczniki na strone;