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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Glycine soja
,
Glycyrrhiza uralensis
,
Lotus japonicus
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Trifolium pratense
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Phaseolus vulgaris
ABOUT THIS RECORD
ID:
MNEST048628
species:
Glycine max
source:
PMRD, original name:
gma-miR2118
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGCCGATTCCACCCATTCCTA
miRNA*
GGAGATGGGAGGGTCGGTAAAG
mismatches:
1
bulges:
2
View larger
pre-miRNA
GAGGAAGTGATG
GGAGATGGGAGGGTCGGTAAAG
AATATATCTGAGACTCGACTCAATCTCGATCTCTCTCAGTGTTGTGTTGTTTTGTTTATCCTT
TTG
CCGATTCCACCCATTCCTA
TGATTTCCTT
dot-bracket secondary structure
((((((((.(((
((((.((((.((((((((((((
((((((.((((((.((((.......))))....))))))...)))))).............))
)))
)))).))).))))))))))
).))))))))
SIMILARITIES
miRBase
gso-MIR2218
:
0.000000000000002
PMRD
vun-miR2118
:
3e-69
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
vun-miR2118
from PMRD (
MNEST054765
)
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
degradome data
download this record
deep sequencing data evidence