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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040632
species: Glycine soja
miRNA family: MIR167
source: miRBase, original name: gso-MIR167a (MI0015357)

Taxonomy by NCBI:
Glycine soja Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTG

miRNA*
GATCATGTGGCTGCTTCACC

mismatches: 1
bulges: 1

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pre-miRNA
GCAGCAGTTGAAGCTGCCAGCATGATCTGAGTTTACCTTCTATTGGTAAGAACAGATCATGTGGCTGCTTCACCTGTTGA

dot-bracket secondary structure
.((((((.((((((.((((.(((((((((..((((((.......))))))..))))))))))))).)))))).)))))).


SIMILARITIES
miRBase gma-MIR167g: 6e-39

PMRD gma-miR167n: 1e-30

microPC miR167: 1e-30
UniProt no hits

RFAM MIR167_1: 0.00000002

Identical with: miR167 from microPC (MNEST045751)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern

references

[1] Chen R, Hu Z, Zhang H, J Integr Plant Biol. 51:1071-1079(2009)., "Identification of microRNAs in wild soybean (Glycine soja)"




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