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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST008923
species: Phaseolus vulgaris
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCACTGCCTCTTCCCTGGCT

miRNA*
 CTGGGAAAAGGCAGAGCAAG

mismatches: 2
bulges: 1
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pre-miRNA
 AGAGAAGAGACAGGACAAAGGCTGGGAAAAGGCAGAGCAAGAATGTAGCTATTGACAGAAATGGTGAAGTGAGAATGAGAGGAGAGAGATATCTGTTGTG
GCTACGCTCATGCACTGCCTCTTCCCTGGCTCTCTCTCTTTCTTGTTCC

dot-bracket secondary structure
.(((((((((.((......(((((((((.((((((.(((.((.(((((((((.((((((.((..........................)).)))))))))
)))))).)).))).)))))).))))).)))))).)))).))))).....


SIMILARITIES
miRBase ahy-MIR408: 0.000000000002

PMRD gma-miR408a: 5e-16

microPC miR408: 6e-59		UniProt no hits

RFAM MIR408: 3e-33		most similar mature miRNAs

Identical with: miR408 from microPC (MNEST045394)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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