miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST045386
species: Vigna unguiculata
source: microPC, original name: miR1507

Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTCATTCCATACATCGTCTGA

miRNA*
 AGAGGTGTATGGAGTGAGAGA

mismatches: 1
bulges: 1
View larger
pre-miRNA
 CAGAGGTGTATGGAGTGAGAGAAGGGAAAAACGCCTTTCCCGATCTCATCGGTTCTTTCTTTCCTCTCTCATTCCATACATCGTCTGA

dot-bracket secondary structure
((((((((((((((((((((((.(((((...........(((((...))))).......))))))))))))))))))))))).)))).


SIMILARITIES
miRBase vun-MIR1507b: 7e-45

PMRD vun-miR1507b: 7e-45

microPC miR1507: 7e-45		UniProt no hits

RFAM no hits

Identical with: vun-miR1507b from PMRD (MNEST054764)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;