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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Glycine soja
,
Glycyrrhiza uralensis
,
Lotus japonicus
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Trifolium pratense
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Phaseolus vulgaris
ABOUT THIS RECORD
ID:
MNEST007528
species:
Vigna unguiculata
miRNA family:
MIR172
source:
miRNEST
Taxonomy by NCBI:
Vigna unguiculata
Vigna
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGAATCTTGATGATGCTGCAT
miRNA*
GTAGCATCATCAAGATTCA
mismatches:
0
bulges:
2
View larger
pre-miRNA
TCACAGTCGTTGTTTGCGGAT
GTAGCATCATCAAGATTCA
CATGCAAACGAAGGTGGATGGGACTGTGATGCAATCTAACCGCTCGTCTTTTTGATGTG
A
GAATCTTGATGATGCTGCAT
CAGCCATAAACGACTTTA
dot-bracket secondary structure
....(((((((....((.(((
(((((((((((((((((((
(((.((((.((.(((((...(((.(((...))).)))..)))))..))..)))))))))
)
..))))))))))))))))))
).))....)))))))...
SIMILARITIES
miRBase
gma-MIR172b
:
4e-38
PMRD
gma-miR172b
:
4e-38
microPC
miR172
:
0.000007
UniProt
no hits
RFAM
mir-172: 0.000000000009
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record