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Species belonging to selected taxon:
Fagus sylvatica
,
Quercus petraea
,
Quercus robur
ABOUT THIS RECORD
ID:
MNEST002303
species:
Quercus petraea
miRNA family:
MIR1510
source:
miRNEST
Taxonomy by NCBI:
Quercus petraea
Quercus
Fagaceae
Fagales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGGAGGAATAGGTAAAACAAC
miRNA*
TGTTTACAGTATGATTTCCAA
mismatches:
3
bulges:
2
View larger
pre-miRNA
ATTCGGGGAAT
GGGAGGAATAGGTAAAACAAC
TCTAGCAAGAGT
TGTTTACAGTATGATTTCCAA
TCAATTTG
dot-bracket secondary structure
.......((.(
(((((..(((.(((((.((((
(((....)))))
)))))))..)))..)))))).
))......
SIMILARITIES
miRBase
gso-MIR1510a
:
0.00001
PMRD
gma-miR1510a
:
0.00001
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record