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Species belonging to selected taxon:

Fagus sylvatica, Juglans hindsii x Juglans regia, Quercus petraea, Quercus robur



ABOUT THIS RECORD

ID: MNEST001288
species: Juglans hindsii x Juglans regia
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTTTCCTACTCCTCCCATTCC

miRNA*
AATGGGAAGATAGGAAAGAAC

mismatches: 1
bulges: 1

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pre-miRNA
AAGTTCTTCGGAATGGGAAGATAGGAAAGAACCAAGGTGTTGTCAGAAACATCTTTGTTTTCTTTCCTTCTTTCCTACTCCTCCCATTCCATTGGTTT

dot-bracket secondary structure
.........(((((((((.(((((((((((((.((((((((......)))))))).))..........))))))))).)).)))))))))........


SIMILARITIES
miRBase vvi-MIR482: 0.00002

PMRD vvi-miR482: 0.00002

microPC miR482: 1e-40
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: miR482 from microPC (MNEST044917)

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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