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Species belonging to selected taxon:

Brugia malayi, Onchocerca volvulus



ABOUT THIS RECORD

ID: MNEST038092
species: Brugia malayi
miRNA family: let-7
source: miRBase, original name: bma-let-7 (MI0013319)

Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGGTTGTATAGTT

miRNA*
CTGTCCAGCCTGCTAGCTTGCC

mismatches: 3
bulges: 0

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pre-miRNA
ATGCTAACGACCCTGAATGATAGCTTGCTCGATGAGGTAGTAGGTTGTATAGTTATGAGTTGTACCATAATCGGAGAAACTGTCCAGCCTGCTAGCTTGC
C
GTGCGGGTCTATCATCCGTCCCC


dot-bracket secondary structure
........(((...((.(((((((((((.((..(((.((((((((((.((((((.(((..((...))...)))....)))))).)))))))))).)))..
)
).))))).)))))))).)))...



SIMILARITIES
miRBase pma-let-7a-2: 0.000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 4e-38

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Northern

references

[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"




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