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Species belonging to selected taxon:

Physcomitrella patens



ABOUT THIS RECORD

ID: MNEST006966
species: Physcomitrella patens
miRNA family: MIR1065
source: miRNEST

Taxonomy by NCBI:
Physcomitrella patens Physcomitrella Funariaceae Funariales Funariidae Bryopsida Moss Superclass V Bryophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACAGTCTCTGACTTCTCGCAN

miRNA*
GCGGGAAATCAGAGACAGTCG

mismatches: 3
bulges: 0

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pre-miRNA
GTACTGATTCCGAAGGAGAAGACAGTCTCTGACTTCTCGCANAGTGAGCCTGTTTCTGCAGTACTGGAACGATTGGTTGAGACCACTGGCACTAGGCAAA
AACCTTGTTTCTGGTGACTTGGTCTGGGATCGTACAGAGCTGCAGAACGCTTGACATGCGGGAAATCAGAGACAGTCGCTTCCTTTGGTTTCTAAT


dot-bracket secondary structure
.....((..(((((((((..(((.((((((((.((((((((..((((((....(((((((((.(((..((((((...(.((((((..((((((((((((.
....))))..)))))).)))))))).))))))).))).))))))))).)))).)).)))))))).)))))))).)))..)))))))))..))....



SIMILARITIES
miRBase ppt-MIR1065: 4e-107

PMRD ppt-miR1065: 4e-107

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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