miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Physcomitrella patens



ABOUT THIS RECORD

ID: MNEST006962
species: Physcomitrella patens
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Physcomitrella patens Physcomitrella Funariaceae Funariales Funariidae Bryopsida Moss Superclass V Bryophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGTCTTCCTCTTCCTCTTCCT

miRNA*
GGGGAAAGGGGGAAGTGTCT

mismatches: 5
bulges: 1

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pre-miRNA
ACTCACCATGCCGTCTTCCTCTTCCTCTTCCTCTTCTTCTTCTTGCTGCTGCTAATCCCCTCTCCTACGANAATCCCGAGAGATTTTTGCCGTCATTCCT
TCGGGTTTCGAAGGTGGGAAGACCCCTCCCTGGGATTCAATCTTGAGGTTTCGAGATCAAGGTGGGGGAAAGGGGGAAGTGTCTTGATTTGA


dot-bracket secondary structure
......((.((...(((((((((..((((((...((((..(((((..(((...((((((....(((.(((..(.((((((.((.............)).)
)))))).))).))).((((.......)))).)))))).........)))..)))))..)))).)))))).))))))))).))..))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
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